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Creators/Authors contains: "Fan, Yi"

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  1. Cancer immunity is subjected to spatiotemporal regulation by leukocyte interaction with neoplastic and stromal cells, contributing to immune evasion and immunotherapy resistance. Here, we identify a distinct mesenchymal-like population of endothelial cells (ECs) that form an immunosuppressive vascular niche in glioblastoma (GBM). We reveal a spatially restricted, Twist1/SATB1-mediated sequential transcriptional activation mechanism, through which tumor ECs produce osteopontin to promote immunosuppressive macrophage (Mφ) phenotypes. Genetic or pharmacological ablation of Twist1 reverses Mφ-mediated immunosuppression and enhances T cell infiltration and activation, leading to reduced GBM growth and extended mouse survival, and sensitizing tumor to chimeric antigen receptor T immunotherapy. Thus, these findings uncover a spatially restricted mechanism controlling tumor immunity and suggest that targeting endothelial Twist1 may offer attractive opportunities for optimizing cancer immunotherapy. 
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  2. We study the influence of solid boundaries on dynamics and structure of kinesin-driven microtubule active fluids as the height of the container, H, increases from hundreds of micrometers to several millimeters. By three-dimensional tracking of passive tracers dispersed in the active fluid, we observe that the activity level, characterized by velocity fluctuations, increases as system size increases and retains a small-scale isotropy. Concomitantly, as the confinement level decreases, the velocity-velocity temporal correlation develops a strong positive correlation at longer times, suggesting the establishment of a "memory". We estimate the characteristic size of the flow structures from the spatial correlation function and find that, as the confinement becomes weaker, the correlation length, l_c, saturates at approximately 400 microns. This saturation suggests an intrinsic length scale which, along with the small-scale isotropy, demonstrates the multiscale nature of this kinesin-driven bundled microtubule active system. 
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  3. The current industrial approach to sonidegib utilizes wasteful organic solvents and relies on high loadings of endangered Pd. This anticancer drug can now be synthesized in 5 steps using only 3 pots, along with ppm levels of a Pd catalyst, all done in water at ambient temperatures. 
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  4. In this paper, we consider the task of discovering the common objects in images. Initially, object candidates are generated in each image and an undirected weighted graph is constructed over all the candidates. Each candidate serves as a node in the graph while the weight of the edge describes the similarity between the corresponding pair of candidates. The problem is then expressed as a search for the Maximum Weight Clique (MWC) in this graph. The MWC corresponds to a set of object candidates sharing maximal mutual similarity, and each node in the MWC represents a discovered common object across the images. Since the problem of finding the MWC is NP-hard, most research of the MWC problem focuses on developing various heuristics for finding good cliques within a reasonable time limit. We utilize a recently very popular class of heuristics called local search methods. They search for the MWC directly in the discrete domain of the solution space. The proposed approach is evaluated on the PASCAL VOC image dataset and the YouTube-Objects video dataset, and it demonstrates superior performance over recent state-of-the-art approaches. 
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